2026-10-14T20:04:47Z https://www.scidb.cn/oai

10.57760/sciencedb.0123g 2026-09-10T14:04:53Z

2026-09-10 MIAO: data and analysis resources accompanying the manuscript doi:10.57760/sciencedb.0123g en Data and analysis resources accompanying the MIAO manuscript. The dataset includes the Human intORF Atlas catalogue and catalogue-level Benjamini–Yekutieli analysis; 105 sample-level Dirichlet–multinomial result tables from six GEO series; the nine-method spike-in benchmark and H1 replicate reproducibility analyses; GSE131650 iPSC–cardiomyocyte RNA-seq counts, DESeq2 scripts and results; pancreatic HLA-I immunopeptidomics reanalysis; exact random-library generation materials and core native results for the Atlas and 100 matched random libraries; figure Source Data; and Fig. 6 integration and confidence-interval scripts.The 9,921 exact-candidate search union is distinct from the supported catalogue of 1,762 isoforms and 1,684 families. The core 101-search archive contains 1,515 matched sample-level PSM and peptide table pairs, with selected large or regenerable intermediates intentionally excluded. Supplementary Tables 3–8 are designated for submission with the manuscript and are not duplicated here. The archive comprises 21 data/provenance packages plus README.md, MANIFEST.json and SHA256SUMS.txt (24 files; approximately 24.681 GB). See README.md for provenance, software environments and reproducibility limitations, and the manifest and checksums for file integrity. No analyses were rerun during packaging.Original sequencing and mass-spectrometry RAW data are referenced rather than duplicated. The pancreatic HLA-I source data are available under MassIVE MSV000096853 / ProteomeXchange PXD059832. Software: https://github.com/HaomiaoSu/MIAO-ORF . Human intORF Atlas: https://intorfatlas.com/ . intORF; ribosome profiling; overlapping translation; immunopeptidomics Haomiao Su PUBLIC https://creativecommons.org/licenses/by/4.0/ dataset Science Data Bank