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    <responseDate>2026-10-14T17:32:00Z</responseDate>
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    <identifier>10.57760/sciencedb.21934</identifier>
    <datestamp>2025-03-28T11:26:37Z</datestamp>
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  <dc:date>2025-03-28</dc:date>
  <dc:title>Soybean leaf siRNA and bisulfite sequencing</dc:title>
  <dc:identifier>doi:10.57760/sciencedb.21934</dc:identifier>
  <dc:language>en</dc:language>
  <dc:description>In plants, many dominant effects, such as overdominance, incomplete dominance, or codominance, are commonly observed and utilized, but poorly understood. Here, we report an identical phenotype of super-early flowering dominance only in heterozygotes but not in homozygotes in soybean, and reveal the molecular mechanism of this new phenomenon. We found that the homozygous gene triggers siRNA-mediated DNA methylation, causing transcriptional gene silencing, while the heterozygous gene does not. Interestingly, two rounds of DNA methylation establishment occur, each mediated by a distinct mechanism. The 21-22 nucleotide (nt) siRNAs are responsible for initiating DNA methylation in the CHH-context during the initial homozygosity of genes when the mother plants were heterozygous. In contrast, the 24 nt siRNAs play a role in the additional CHG- and CG-context DNA methylation during successive homozygosity of genes when the mother plants were already homozygous. Additionally, generating heterozygous genotype through a crossing experiment with recessive genotype can reduce the DNA methylation level and resume dominant phenotype. Our study provides a new insight into the molecular mechanism of the novel dominant effects and enriches the genetic theory of plants.</dc:description>
  <dc:subject>Flowering time; s   iRNA; DNA methylation</dc:subject>
  <dc:creator>Xin Xu</dc:creator>
  <dc:rights>PUBLIC</dc:rights>
  <dc:rights>https://creativecommons.org/licenses/by-nc-sa/4.0/</dc:rights>
  <dc:type>dataset</dc:type>
  <dc:publisher>Science Data Bank</dc:publisher>
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