2026-10-14T19:47:46Z https://www.scidb.cn/oai

10.57760/sciencedb.j00139.00203 2025-04-21T10:04:01Z

2025-04-21 Single-cell RNA-seq provides insight into the underdeveloped immune system of germ-free mice doi:10.57760/sciencedb.j00139.00203 en This RDS file contains processed single-cell RNA sequencing (scRNA-seq) data comparing immune cell populations from germ-free (GF) and specific-pathogen-free (SPF) mice. The dataset includes:Samples: Peripheral blood (PB) and bone marrow (BM) from GF and SPF miceCell Counts:Raw: 21,827 cells (PB) and 19,940 cells (BM)Quality-filtered: 18,344 high-quality cells (PB) and 16,537 high-quality cells (BM)Gene Coverage: Median 1,426 genes per cell (PB) and 1,391 genes per cell (BM)Cell Classifications: 18 major cell identities further divided into 25 subpopulationsAnnotation: Cells identified using established marker genes for blood cells germ-free mice; microbiota; single-cell RNA sequencing; underdeveloped immune system Yifei SHENG Xiaodong FANG PUBLIC https://creativecommons.org/licenses/by-nc/4.0/ dataset http://www.doi.org/10.24272/j.issn.2095-8137.2024.467 Science Data Bank